Productivityobsidiannote-taking

Obsidian Organization

By Blake Marterella
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Published on
Obsidian Organization Config

Obsidian can quickly turn from a clean canvas into an overwhelming tangle of notes if you don’t have a system. After experimenting with countless folder hierarchies, tag schemes, and plugin setups, I’ve landed on an organization method that balances flexibility with structure. In this post, I’ll walk through the principles and patterns I use to keep my vault scalable, searchable, and, most importantly, usable, even as it grows to thousands of notes.

Core Organization Principles

RuleWhy it matters in Obsidian
One home, many doors – every topic gets a single Map-of-Contents (MOC) note that only contains links (no long prose).You always have one place to start, and graph backlinks keep child notes easy to surface.
Folders say “where”
Tags say “what”
Backlinks say “how things connect”
Avoid duplicating meaning: the folder shows context, tags add facets (status / type / domain), links record relationships.
≤ 5 folders deep and preferably 3.Keeps paths readable on mobile and prevents “Russian-doll” navigation.
MOCs link down, children link up.Two-way navigation even when you jump into a note from global search.
Templates for repeatables (projects, courses, daily, tutorial).Reduces friction and enforces the pattern.

Top-Level Spaces

The top level spaces for my main Obsidian vault loosely follow the PARA Method. Each folder has a specific purpose and is named with a two-digit prefix to keep them sorted in the desired order.

FolderPurpose
00 MOCsOrganizational hub linking to more in-depth topics
01 Daily-NotesAuto-created daily pages, quick-capture, fleeting ideas.
02 AreasLong-term responsibilities (Academic, Professional, Finances, Health…).
03 ProjectsTime-boxed outcomes (< 12 months). Each gets its own mini-tree and MOC.
04 ResourcesKnowledge collected through experience, research, trial-error, etc. (frameworks, tools, paradigms…). MOC-driven.
05 CollectionsStructured content libraries that act as independent databases. For example: A collection of movies watched with an associated rating.
07 PlaygroundDisposable experiments, plugin tests, canvas doodles.
08 ObsidianTemplates, plugin configurations, and snippets that improve usability of Obsidian.
09 ArchiveFinished or obsolete material.

Here are general rules that I follow to make categorization fast and nearly automatic:

  • Areas: I'm responsible for it
  • Projects: I'm doing it
  • Resources: I'm learning it
  • Collections: I'm tracking it

Tag Taxonomy

General Rules: Keep tags lowercase, singular, and 1-2 words (separated by hyphen). Here is a reddit post on the difference between tags and linked pages in Obsidian.

Tag familyExamplesWhen to apply
Status#idea, #draft, #in-progress, #doneFor tasks, blog posts, project docs.
Type#concept (theory), #how-to, #reference, #snippet, #tutorialLets Dataview group different note kinds even across folders.
Domain#webdev, #ai, #hardware, #personalBroad subjects that cut across folders.
Temporal (rare)#2025Q3, #semester-F25Only when you need cohort-style aggregation.

Resources

Map of Contents (MOC)

Custom Scripts and Commands